Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015885995.1_cds_XP_016440095.1_35587
CDS Infomation

[gene=LOC107765909] [db_xref=GeneID:107765909] [protein=proline-rich receptor-like protein kinase PERK12 isoform X2] [protein_id=XP_016440095.1] [location=join(17626..17779,17873..17946,18086..18204,18329..18444,18539..19093,19169..19417,19506..19663,19872..20099,20193..20342,20748..21011)] [gbkey=CDS]
Sequence

ATGATTTTTGAGAAGGAAAAAAAATCAGAAAAGAGAAATGTGCTAGTTGGAATTCGATTT
GACGGCCATATTAGAGAGTTGTTGAATTGGGCTATTGTAAAATTTGCAAATCCTGGAGAT
AGGGTTGTTGCTCTACATGTTTGTCGAAATTCAGATTCAATTGCAAAAGATAAATCCTTG
TTGGACACTTATCTGGATGATTATGATGGCTTATGTAATAAAAAGCAGGTGGATATTATT
TCTCTGGTGTTAAAAGGAAGTTCAATTAGAAGAGTTTTGGTAAGAGAAGCAAAGAACCAT
TCTGCAGTTGCTGTAGTTGTAGGAACTAGCAAACATAGTACTCTTGGGAGCTGGACCTCA
ATTTCTAAATATTGCGCAAAGCGGCTTCCTATCACTACTGAGATTATGGCCATTGACAAT
GGGAAGGTTTTCTTTAGAAGAAGCTCTAATTCCCAACTCAAAGGTTCTTTTAGTGATCCA
AAACCGAGTCTTCAATCAGAAAGAAGTTCTACTCTAAGGGATTGCCTATCTGAATTTGTT
GAATCTGAGATATCCGAAATGGGAAGATTCAGTTATGAAGTGAGTAATACTGAGAATCCA
AAAGAGGAAACTGTGAGTTCTTTGGCGAAACACAAGAAAAATTCTCTTTCACTAGGTTCA
ATTTCTCTTCCTACCGAAGATTTTGCTGCTGATAGACCTGGTTGGCCGCTTTTACAAACC
GCGAGTTCATTGAATCAACCAGCTAAAGTAGTAAGAAAAATGTCGGTGGTGCAATGGGTG
ATGACCTTGCCAAATCGATCTATGTTAGATAGTCCTAAATCCGATTTTTCTCCAAAGGAA
TCGCCAAATGCCTTTGGGATGGAACAAAAATACTTCATGGATTGTAATGAAAAGGAAAGT
GCATCAGTTTGTAACCAGCTGATAAAAGATTTGCAGCTTATACTTGAGGCAAATTCATCC
GGCATCAAATGGTTTAGCTATGATGTTTTAAAATCATCGACTTCCAACTTCTCCTCAGAG
AAATTGATTGGAAAAGGAGGGCGCAACAGTGTATATAAAGCTCAGCTTTCTGATGGAAAA
TCAGTGGCAGTAAAGATTTCCAGTTCATCAGAGGAAGCGCGAAAAGATTTCAGGCAGGAA
ATGGACATTATGACAAGAGTTAAACACATGAATATTGCTAATCTACTTGGAATTTGCATA
GAGGATTCCCATCTGATATCTGTTTACAATTTTCTTTCACAAGGAAATTTAGAAGAAAAT
ATACATGGAAGAAGCAAATCAGTTTTGCAATGGGAAAGAAGATTCAAAATCGCCGTTGGA
ATAGCAGAAGCCTTAAATTACCTACACAATGAATGTCCAAGGCCTGTTATTCACAGAGAT
GTCAAGTCATCAAACATCCTTCTCAGTGATGATTTTGAACCACAGTTATCAGATTTTGGG
TTAGCAATATGGGGACCCACAAAAGCATCCTACTTGACTCATAGTGATGTGGTAGGAACC
TTTGGATATCTAGCACCAGAGTATTTTATGTATGGGAAAGTAAGTGATAAGATTGATATC
TACTCCTTTGGTGTGGTTCTGTTGGAACTATTATCAGGGAGAAAAGCTATTGGCTTTGAG
ACTCCCAGTGGTCAAGAAAGTTTAGTCATGTGGGCGAAACCCAAGTTAGAAAGTGAGGAT
ATTAAAGCAATTTTGGATGAGAATTTGGATGTGAATGTTGAAGATGATAAAGTCCAAAGA
ATGATTCTTGCAGCAAAACTCTGTCTTACACAAGCAGCAAGGCTACGTCCTAACATAAAC
CAGATTCTGAAGATGTTGAAGGGGGAGAAAGATGGGAATGAAGAAGCTAATGGTGGAAGT
GGTGAGGATCATAACAATATAGAAGAATATAATGATGATGAAGTATATCCAGATTCAAGT
GCAGAGTCCCATTTAAGTCTTGCATTACTTGATGTGAATGATAATTCCACATCTTTCAGC
AGTAGTCAGGACCAAAGCAGCCCTCTTTCTTCTGTAGATGAATACTTGAGAAAAACGTGG
AGCAGATCCTCAAGCTCAGAATATTAG

Peptide Sequence

PEP ID

XP_016440095.1
PEP Infomation

PREDICTED: proline-rich receptor-like protein kinase PERK12 isoform X2 [Nicotiana tabacum]
Sequence

MIFEKEKKSEKRNVLVGIRFDGHIRELLNWAIVKFANPGDRVVALHVCRNSDSIAKDKSL
LDTYLDDYDGLCNKKQVDIISLVLKGSSIRRVLVREAKNHSAVAVVVGTSKHSTLGSWTS
ISKYCAKRLPITTEIMAIDNGKVFFRRSSNSQLKGSFSDPKPSLQSERSSTLRDCLSEFV
ESEISEMGRFSYEVSNTENPKEETVSSLAKHKKNSLSLGSISLPTEDFAADRPGWPLLQT
ASSLNQPAKVVRKMSVVQWVMTLPNRSMLDSPKSDFSPKESPNAFGMEQKYFMDCNEKES
ASVCNQLIKDLQLILEANSSGIKWFSYDVLKSSTSNFSSEKLIGKGGRNSVYKAQLSDGK
SVAVKISSSSEEARKDFRQEMDIMTRVKHMNIANLLGICIEDSHLISVYNFLSQGNLEEN
IHGRSKSVLQWERRFKIAVGIAEALNYLHNECPRPVIHRDVKSSNILLSDDFEPQLSDFG
LAIWGPTKASYLTHSDVVGTFGYLAPEYFMYGKVSDKIDIYSFGVVLLELLSGRKAIGFE
TPSGQESLVMWAKPKLESEDIKAILDENLDVNVEDDKVQRMILAAKLCLTQAARLRPNIN
QILKMLKGEKDGNEEANGGSGEDHNNIEEYNDDEVYPDSSAESHLSLALLDVNDNSTSFS
SSQDQSSPLSSVDEYLRKTWSRSSSSEY

Transcript Sequence

Gene sequence data has not been registered.